PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj3g3v3747740.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 359aa    MW: 41654.4 Da    PI: 6.5133
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj3g3v3747740.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1791.2e-5571361129
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                      +ppGfrFhPtdeelv++yL+kkv+++k++l +vik+vd+yk+ePwdL++  ++   e+++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk+
  Lj3g3v3747740.1   7 VPPGFRFHPTDEELVDYYLRKKVASRKIDL-DVIKDVDLYKIEPWDLQEicRIGReEQSDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKA 99 
                      69****************************.9***************954544442555*********************************** PP

              NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                      ++s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle
  Lj3g3v3747740.1 100 IYS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
                      ***.8899****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.29E-615156IPR003441NAC domain
PROSITE profilePS5100559.8557156IPR003441NAC domain
PfamPF023657.1E-298135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MNAFSHVPPG FRFHPTDEEL VDYYLRKKVA SRKIDLDVIK DVDLYKIEPW DLQEICRIGR  60
EEQSDWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETDEN ATPQEEGWVV CRVFKKRVAA TSMRRVSEHA SPCWYDDQVS  180
FMPDLDSPKQ TSQSNMNLVY QQLPYNNNPC KKELEFPYQL PREHFLQLPF LESPKIQLQS  240
SSTMEPFGGS HATTLLQEEQ VQLQTGHQQN FQAMMYGNNN NNTNNIEEQV TDWRVLDKFV  300
ASQLSQDDHA ASNSKDNNNS YSSNTAPANM FHSTDNNNGA LQFTHLDKQD MVPENAAWK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-50615714169Stress-induced transcription factor NAC1
3swp_D5e-50716020172NAC domain-containing protein 19
3swp_C5e-50716020172NAC domain-containing protein 19
3swp_B5e-50716020172NAC domain-containing protein 19
3swp_A5e-50716020172NAC domain-containing protein 19
3swm_D5e-50716020172NAC domain-containing protein 19
3swm_C5e-50716020172NAC domain-containing protein 19
3swm_B5e-50716020172NAC domain-containing protein 19
3swm_A5e-50716020172NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006587710.10.0PREDICTED: NAC domain-containing protein 7-like
SwissprotQ9FWX21e-139NAC7_ARATH; NAC domain-containing protein 7
TrEMBLI1L5Q50.0I1L5Q5_SOYBN; Uncharacterized protein
STRINGGLYMA09G36600.11e-180(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126933106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-124NAC 007